PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01592.1.g00040.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 298aa    MW: 32295.1 Da    PI: 8.3512
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01592.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-184999155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  s++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae Aaka+++a++ l+g
  Zpz_sc01592.1.g00040.1.am.mk 49 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEAAAKAYDEAARLLRG 99
                                  79********.7*********32...35***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-124999IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-1949108IPR016177DNA-binding domain
CDDcd000181.61E-1649107No hitNo description
SMARTSM003801.8E-3350113IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.3E-2750107IPR001471AP2/ERF domain
PROSITE profilePS5103219.91550107IPR001471AP2/ERF domain
PRINTSPR003675.6E-75162IPR001471AP2/ERF domain
PRINTSPR003675.6E-77389IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MELHFQVQPP AAAFQVEDYC YYYYQQEAAA AQAKPGKPRG RKKGNNNHSK FVGVRQRPSG  60
RWVAEIKDTT QKIRMWLGTF ETAEAAAKAY DEAARLLRGA DTRTNFAPRI SPNCPLAVRI  120
RGLLHHKKVK KQAKPSAAAS SSSAAGSSKK NASSSPAPAT SNSNSSDSRD SACGGSSSSL  180
SSCDDAMKRV GEVYRPDIAP LAAEEFDSWM FDSAFGQFSP LDGFPATIDS AVPAAPTLTE  240
EPRPAAAPGE MAEFERIKVE RRISASLYAI NGLQEYFDRV FDASACDSSL WDLSPLCH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0404151e-121BT040415.1 Zea mays full-length cDNA clone ZM_BFc0090C04 mRNA, complete cds.
GenBankJX4699531e-121JX469953.1 Zea mays subsp. mays clone UT3215 AP2-EREBP-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004958111.11e-114PREDICTED: ethylene-responsive transcription factor RAP2-11
TrEMBLK3ZVQ51e-119K3ZVQ5_SETIT; Uncharacterized protein
STRINGSi030686m1e-119(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-26related to AP2 11